Raw proteomic data collected from LCMS experiments can be difficult to access and process, particularly with common data tools such as R and Python. We provide services to convert your instrument specific data into a universal format enabling open access and efficient data processing across most all programming languages.
Converts mass spectrometry raw data from proprietary vendor formats, or mzML, into an simplified HDF5 file.
Proprietary format files from 7 of the top instrument vendors are first translated by ProteoWizard.
A universally accessible XML file, gets translated into a simplified data object containing tables, arrays and matrices.
Optional: download selected tables as CSV files.
Optional: download selected tables as SQL files for importing directly into MySQL or MariaDB.